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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827762.1_cds_XP_016503177.1_16745
CDS Infomation

[gene=LOC107821265] [db_xref=GeneID:107821265] [protein=beta-hexosaminidase 1-like] [protein_id=XP_016503177.1] [location=complement(join(34563..34738,35292..35542,35620..35679,36207..36305,36687..36720,37914..37973,38766..38866,39816..39864,40019..40035,41170..41300,41384..41454,41622..41733,41851..41886,45391..45474,45884..46225))] [gbkey=CDS]
Sequence

ATGTCCTCAAATTCCCAATTTCTATTCAAAACCCTCATCTTACTCTTCATTTTCCCATTG
GTCAACTCTCGTTCTATAAAGTCAACGTTTCATAAAACTACAGAGCTCGACGAATCATTA
ACATATCTATGGCCTTTGCCTTCTCAATTCACTTTCGGAAACGATACGCTTACTGTTGAT
CCCAATTTGTCAATTGTTTTTACTGGCAATGGTGTTGGGTCTGTTATTGTTAAAGAAGCG
TTTGAGAGATACAAAAAGATTATTTTCAAGCATGGTTCTAAGTCTGGTGAATTTTTTGAT
GTTACTCAGCTTACTGTCATTGTTCATTCCGATAACGACGAGCTGCAACTTGGTGTTGAT
GAGAGCTATTCGTTATTGGTGACGAAGAGCAATGAGCATTCGATTATCGGGGAAGTCTCG
ATTGAGGCAAATTCTGTTTATGGTGCACTAAGAGGACTTGAGACAATGAGTCAGTTATGT
ATTTTTGATTATGGGGTTAAAACAGTGCAAATTCACAAGGCTCCATGGTTTATTCAAGAC
AAGCCAAGATTTGCATATCGCGGGCTTCTGCTAGATACGTCAAGGCACTATTTGCCAATT
GAAATTATCAAGCAAATTATTGAATCCATGTCCTACGCTAAACTTAATGTTCTTCATTGG
CACATCATAGATGAAGAGTCATTTCCTCTAGAAGTGCCTTCATATCCAAACTTGTGGAAA
GGGTCATATACAAAGTGGGAACGCTACACTGTCGAGGATGCTTATGAAATTGTTGACTTT
GCTAAGATGAGAGGTATCAATGTTATGGCAGAAGTCGATGTTCCAGGTCATGCAGAATCA
TGGGGTGTAGGGTACCCTGATCTTTGGCCTTCTCCATCTTGTAAAGAGCCACTAGATGTC
TCAAAAAACTACACTTTTGATGCCATTGCTGGCATCCTGGCAGACATGAGGAAGATTTTT
CCATTTGAGCTGTTCCACTTAGGTGGTGACGAGGTCAACACAACTTGTTGGACAACTACG
CCACACATCAAGCAATGGCTTCAAGATCATAATATGACTTCGAAGGATGCGTATGAGTAT
TTTGTACTCAGAGCTCAAGAAATAGCTATATCACATAGCTGGACACCTGTTAACTGGGAA
GAAACCTTCAATACGTTTCCGTCTAAACTTAACCCGCAGACTGTGGTGCATAACTGGTTA
CGTGGTGATGTTTGTCAAAAGGCAGTTGCAAAAGGTTTTAGATGCATTTATAGCAATCAG
GGGTTTTGGTATCTGGACCACCTAGATGTCCCTTGGGATAAAGTCTATTACACGGAGCCG
CTGGAAGGAATAAAGAGTATTTCCGCGCAAAAACTTGTCCTTGGAGGTGAAGCGTGTATG
TGGGGTGAAACCGCAGATGCTTCAGATGTTCAACAAACCATATGGCCACGGGCTGCAGCT
GTAGCAGAACGGTTGTGGAGCGACAAGGAGGCCACATCTTCAACAAATACTACGTCAGCT
GCATTGCAAAGGTTAGAATACTTTCGATGCCTCTTGACGAGGCGTGGGGTTCCAGCTGCT
CCAGTTACCAATTTTTATGCTCGACGCCCTCCAATAGGGCCAGGATCATGTTATGAACAA
TAA

Peptide Sequence

PEP ID

XP_016503177.1
PEP Infomation

PREDICTED: beta-hexosaminidase 1-like [Nicotiana tabacum]
Sequence

MSSNSQFLFKTLILLFIFPLVNSRSIKSTFHKTTELDESLTYLWPLPSQFTFGNDTLTVD
PNLSIVFTGNGVGSVIVKEAFERYKKIIFKHGSKSGEFFDVTQLTVIVHSDNDELQLGVD
ESYSLLVTKSNEHSIIGEVSIEANSVYGALRGLETMSQLCIFDYGVKTVQIHKAPWFIQD
KPRFAYRGLLLDTSRHYLPIEIIKQIIESMSYAKLNVLHWHIIDEESFPLEVPSYPNLWK
GSYTKWERYTVEDAYEIVDFAKMRGINVMAEVDVPGHAESWGVGYPDLWPSPSCKEPLDV
SKNYTFDAIAGILADMRKIFPFELFHLGGDEVNTTCWTTTPHIKQWLQDHNMTSKDAYEY
FVLRAQEIAISHSWTPVNWEETFNTFPSKLNPQTVVHNWLRGDVCQKAVAKGFRCIYSNQ
GFWYLDHLDVPWDKVYYTEPLEGIKSISAQKLVLGGEACMWGETADASDVQQTIWPRAAA
VAERLWSDKEATSSTNTTSAALQRLEYFRCLLTRRGVPAAPVTNFYARRPPIGPGSCYEQ

Transcript Sequence

Gene sequence data has not been registered.